dotools_py.dt.heart_markers

Contents

dotools_py.dt.heart_markers#

dotools_py.dt.heart_markers(species='mouse')[source]#

Marker genes for cell-types in the heart.

Parameters:
species Literal['mouse', 'human'] (default: 'mouse')

Format for gene names. Set human for everything upper case and mouse for capitalize.

Return type:

dict

Returns:

Returns a dictionary with a list of marker genes for major cell-types present in the heart.

Example

>>> import dotools_py as do
>>> df_mouse = do.dt.heart_markers("mouse")
2025-07-02 10:55:01,623 - Getting mouse markers
>>> df_mouse["EndoEC"]
['Nfatc1', 'Npr3', 'Nrg1', 'Pecam1', 'Cdh5', 'Etv2']

Summary of Markers genes

../../_images/MarkersCellsHeart.png