Data: dt#

The data module contains functions to use with sc/snRNA from the heart and the dataset from PBMC from 10x used in the tutorial.

Example datasets#

dt.example_10x([path])

Download 10X datasets.

dt.example_10x_processed()

Load example datasets from 10x processed.

Utility for heart datasets#

dt.heart_markers([species])

Marker genes for cell-types in the heart.

dt.standard_ct_labels_heart()

Set common cell-type labels in the Human Heart Model from Celltypist.