Index A | B | C | D | E | F | G | H | I | L | M | P | R | S | T | U | V A add_gene_metadata() (in module dotools_py.utility) add_smooth_kernel() (in module dotools_py.utility) auto_annot() (in module dotools_py.tl) B barplot() (in module dotools_py.pl) boxplot() (in module dotools_py.pl) C cell_composition() (in module dotools_py.pl) correlation() (in module dotools_py.pl) D dge_results() (in module dotools_py.get) dotools_py.dt module dotools_py.get module dotools_py.pl module dotools_py.pp module dotools_py.settings module dotools_py.tl module dotools_py.utility module dotplot() (in module dotools_py.pl) E embedding() (in module dotools_py.pl) example_10x() (in module dotools_py.dt) example_10x_processed() (in module dotools_py.dt) expr() (in module dotools_py.get) extended_tab20() (in module dotools_py.utility) F free_memory() (in module dotools_py.utility) full_recluster() (in module dotools_py.tl) G generate_cmap() (in module dotools_py.utility) get_hex_colormaps() (in module dotools_py.utility) go_analysis() (in module dotools_py.tl) grouped_ttest() (in module dotools_py.tl) H heart_markers() (in module dotools_py.dt) heatmap() (in module dotools_py.pl) I importer_py() (in module dotools_py.pp) integrate_data() (in module dotools_py.tl) interactive_session() (in module dotools_py.settings) L layers() (in module dotools_py.pl) lineplot() (in module dotools_py.pl) log2fc() (in module dotools_py.get) M mean_expr() (in module dotools_py.get) module dotools_py.dt dotools_py.get dotools_py.pl dotools_py.pp dotools_py.settings dotools_py.tl dotools_py.utility P pcts_cells() (in module dotools_py.get) plot_stats() (dotools_py.pl.StatsPlotter method) pseudobulk() (in module dotools_py.get) pvalues() (dotools_py.pl.TestData class method) pvalues_labels() (dotools_py.pl.TestData class method) R rank_genes_condition() (in module dotools_py.tl) rank_genes_consensus() (in module dotools_py.tl) rank_genes_groups() (in module dotools_py.tl) rank_genes_pseudobulk() (in module dotools_py.tl) read_rds() (in module dotools_py.utility) reclustering() (in module dotools_py.tl) run_cellbender() (in module dotools_py.pp) run_mast() (in module dotools_py.tl) run_test() (dotools_py.pl.TestData method) S save_rds() (in module dotools_py.utility) sctransform_normalise() (in module dotools_py.pp) select_slide() (in module dotools_py.utility) session_settings() (in module dotools_py.settings) slides() (in module dotools_py.pl) spine_format() (in module dotools_py.utility) split_bar_gsea() (in module dotools_py.pl) split_embeddding() (in module dotools_py.pl) standard_ct_labels_heart() (in module dotools_py.dt) StatsPlotter (class in dotools_py.pl) subset() (in module dotools_py.get) T TestData (class in dotools_py.pl) transfer_labels() (in module dotools_py.utility) U umap() (in module dotools_py.pl) V violinplot() (in module dotools_py.pl) volcano_plot() (in module dotools_py.pl)
